Best Alignments for T0372

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ne9A/T0372-1ne9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ne9A/T0372-1ne9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5671e-052.37e-46 d.108.1.4
d.108.1.4
1mk4A/T0372-1mk4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mk4A/T0372-1mk4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0270e-032.59e-24 d.108.1.1
1sqhA/T0372-1sqhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sqhA/T0372-1sqhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3877e-022.34e-30 d.108.1.5
2ge3A/T0372-2ge3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ge3A/T0372-2ge3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4312e-023.73e-24
2fe7A/T0372-2fe7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe7A/T0372-2fe7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1535e-024.56e-22
1z4eA/T0372-1z4eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z4eA/T0372-1z4eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5286e-021.19e-19
2d4pA/T0372-2d4pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d4pA/T0372-2d4pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7406e-021.76e-17
1yvkA/T0372-1yvkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yvkA/T0372-1yvkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5063e-017.35e-17
2c27A/T0372-2c27A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c27A/T0372-2c27A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7412e-011.79e-34
2cy2A/T0372-2cy2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cy2A/T0372-2cy2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9227e-011.18e-18

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001