Best Alignments for T0370

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1rfeA/T0370-1rfeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rfeA/T0370-1rfeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7552e-155.31e-64
1dnlA/T0370-1dnlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dnlA/T0370-1dnlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3974e-142.54e-60 1ci0A b.45.1.1
2fhqA/T0370-2fhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhqA/T0370-2fhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6604e-127.61e-54
2asfA/T0370-2asfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2asfA/T0370-2asfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5209e-121.27e-58
1t9mA/T0370-1t9mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t9mA/T0370-1t9mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2046e-111.23e-50
2aq6A/T0370-2aq6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aq6A/T0370-2aq6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4990e-112.50e-45
1ty9A/T0370-1ty9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ty9A/T0370-1ty9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4235e-104.69e-50
1xxoA/T0370-1xxoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxoA/T0370-1xxoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9973e-104.06e-48
1w9aA/T0370-1w9aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9aA/T0370-1w9aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6635e-102.74e-48
2fg9A/T0370-2fg9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0370-2fg9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0133e-091.03e-48

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001