Best Alignments for T0369

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f22A/T0369-2f22A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f22A/T0369-2f22A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1822e-128.38e-40
1rxqA/T0369-1rxqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxqA/T0369-1rxqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7369e-077.91e-29 a.213.1.1
1ovlA/T0369-1ovlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ovlA/T0369-1ovlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9716e-011.96e-13 a.123.1.1
2bh4X/T0369-2bh4X-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bh4X/T0369-2bh4X-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1854e+002.05e-04
1sqgA/T0369-1sqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sqgA/T0369-1sqgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4157e+001.78e-13 a.79.1.3
c.66.1.38
1xo0A/T0369-1xo0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xo0A/T0369-1xo0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2618e+001.48e-02
2fflA/T0369-2fflA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fflA/T0369-2fflA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9230e+003.54e-07
1o5zA/T0369-1o5zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o5zA/T0369-1o5zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1097e+006.57e-10 c.59.1.2
c.72.2.2
1ufoA/T0369-1ufoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ufoA/T0369-1ufoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6359e+006.22e-07 c.69.1.27

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001