Best Alignments for T0369

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f22A/T0369-2f22A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f22A/T0369-2f22A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3248e-102.06e-37
1rxqA/T0369-1rxqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxqA/T0369-1rxqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6385e-073.45e-27 a.213.1.1
1y8qB/T0369-1y8qB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y8qB/T0369-1y8qB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5883e+001.65e-06
1sqgA/T0369-1sqgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sqgA/T0369-1sqgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7772e+001.59e-08 a.79.1.3
c.66.1.38
1xo0A/T0369-1xo0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xo0A/T0369-1xo0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2416e+002.81e-03
1lrv/T0369-1lrv-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lrv/T0369-1lrv-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3770e+001.98e-09 1lrv a.118.1.5
1n2aA/T0369-1n2aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n2aA/T0369-1n2aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7015e+001.21e-05 a.45.1.1
c.47.1.5
1vb5A/T0369-1vb5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vb5A/T0369-1vb5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0626e+005.19e-17
4crxA/T0369-4crxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 4crxA/T0369-4crxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1551e+001.03e-01 4crxA a.60.9.1
d.163.1.1
1fiy/T0369-1fiy-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fiy/T0369-1fiy-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3342e+002.33e-07 1fiy c.1.12.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001