Best Alignments for T0366

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fe5A/T0366-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe5A/T0366-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4083e-151.43e-57
1tp5A/T0366-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp5A/T0366-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7527e-151.71e-56
2fneA/T0366-2fneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fneA/T0366-2fneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8089e-158.27e-60
1be9A/T0366-1be9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1be9A/T0366-1be9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0657e-151.06e-54 1pdr b.36.1.1
1qavA/T0366-1qavA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qavA/T0366-1qavA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1159e-154.19e-55 1qauA b.36.1.1
2fcfA/T0366-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fcfA/T0366-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0097e-145.42e-55
2h2bA/T0366-2h2bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h2bA/T0366-2h2bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6301e-141.20e-51
2h3lA/T0366-2h3lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h3lA/T0366-2h3lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6016e-139.63e-50
1wf7A/T0366-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wf7A/T0366-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3713e-131.39e-48
1i16/T0366-1i16-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i16/T0366-1i16-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0367e-121.78e-40 1i16 b.36.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001