Best Alignments for T0366

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fneA/T0366-2fneA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fneA/T0366-2fneA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8529e-145.94e-59
1tp5A/T0366-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp5A/T0366-1tp5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4188e-132.45e-58
1be9A/T0366-1be9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1be9A/T0366-1be9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0656e-136.82e-58 1pdr b.36.1.1
2fe5A/T0366-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe5A/T0366-2fe5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0699e-134.10e-55
2fcfA/T0366-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fcfA/T0366-2fcfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8769e-135.88e-55
1qavA/T0366-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qavA/T0366-1qavA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6107e-131.15e-57 1qauA b.36.1.1
2h2bA/T0366-2h2bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h2bA/T0366-2h2bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0260e-121.51e-50
2h3lA/T0366-2h3lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h3lA/T0366-2h3lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4434e-121.10e-48
2f0aA/T0366-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f0aA/T0366-2f0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7229e-111.08e-44
1wf7A/T0366-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wf7A/T0366-1wf7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8693e-114.02e-44

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001