Best Alignments for T0365

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1sumB/T0365-1sumB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sumB/T0365-1sumB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0994e-092.27e-24 a.7.12.1
1xwmA/T0365-1xwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xwmA/T0365-1xwmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9681e-072.48e-25
1vctA/T0365-1vctA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vctA/T0365-1vctA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5821e-027.76e-08
1o5hA/T0365-1o5hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o5hA/T0365-1o5hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5211e-014.26e-14 a.191.1.1
1j1vA/T0365-1j1vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j1vA/T0365-1j1vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2504e+006.95e-08 a.4.12.2
1wkbA/T0365-1wkbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wkbA/T0365-1wkbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5300e+004.42e+00
1n81A/T0365-1n81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n81A/T0365-1n81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0262e+002.33e-13 a.185.1.1
1hw1A/T0365-1hw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hw1A/T0365-1hw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3025e+001.31e-06 1e2xA a.4.5.6
a.78.1.1
1oq9A/T0365-1oq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oq9A/T0365-1oq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4266e+001.19e-04 a.25.1.2
1urvA/T0365-1urvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1urvA/T0365-1urvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7065e+004.03e-04

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001