Best Alignments for T0364

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1s5uA/T0364-1s5uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s5uA/T0364-1s5uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6689e-152.93e-84 d.38.1.1
1z54A/T0364-1z54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z54A/T0364-1z54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2027e-152.04e-78
2cyeA/T0364-2cyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cyeA/T0364-2cyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6143e-151.24e-73
2aliA/T0364-2aliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aliA/T0364-2aliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6635e-123.88e-62
2gf6A/T0364-2gf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gf6A/T0364-2gf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3410e-113.26e-63
2essA/T0364-2essA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2essA/T0364-2essA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8542e-109.28e-68
2av9A/T0364-2av9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2av9A/T0364-2av9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5524e-091.21e-71
1yliA/T0364-1yliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yliA/T0364-1yliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9159e-091.06e-55
1vpmA/T0364-1vpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpmA/T0364-1vpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4051e-093.12e-55
2h4uA/T0364-2h4uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h4uA/T0364-2h4uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2197e-077.93e-45

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001