Best Alignments for T0364

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1s5uA/T0364-1s5uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s5uA/T0364-1s5uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5573e-162.71e-81 d.38.1.1
1z54A/T0364-1z54A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z54A/T0364-1z54A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1125e-158.00e-77
2cyeA/T0364-2cyeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cyeA/T0364-2cyeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6121e-157.05e-70
2av9A/T0364-2av9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2av9A/T0364-2av9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2238e-142.22e-69
2aliA/T0364-2aliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aliA/T0364-2aliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0077e-121.67e-58
2gf6A/T0364-2gf6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gf6A/T0364-2gf6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5304e-115.60e-60
2essA/T0364-2essA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2essA/T0364-2essA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5047e-112.60e-64
1yliA/T0364-1yliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yliA/T0364-1yliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2430e-103.95e-50
1vpmA/T0364-1vpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpmA/T0364-1vpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7448e-103.82e-51
2h4uA/T0364-2h4uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h4uA/T0364-2h4uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6219e-086.90e-44

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001