Best Alignments for T0363

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vjkA/T0363-1vjkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjkA/T0363-1vjkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3173e-053.18e-23 d.15.3.1
1oqqA/T0363-1oqqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oqqA/T0363-1oqqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2619e-023.75e-12 d.15.4.1
2bb6A/T0363-2bb6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bb6A/T0363-2bb6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4040e-022.11e-18
1xlqA/T0363-1xlqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xlqA/T0363-1xlqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4055e-021.19e-11
1ryjA/T0363-1ryjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ryjA/T0363-1ryjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0122e-023.88e-18 d.15.3.2
1zud2/T0363-1zud2-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zud2/T0363-1zud2-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9111e-023.63e-15
2bwfA/T0363-2bwfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bwfA/T0363-2bwfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8475e-023.33e-16
1uwmA/T0363-1uwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uwmA/T0363-1uwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2894e-018.54e-10
2bpsA/T0363-2bpsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bpsA/T0363-2bpsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7357e-017.72e-12
1nbfD/T0363-1nbfD-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nbfD/T0363-1nbfD-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4089e-012.33e-16 d.15.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001