Best Alignments for T0362

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1s5uA/T0362-1s5uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s5uA/T0362-1s5uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0494e-161.18e-79 d.38.1.1
2cyeA/T0362-2cyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cyeA/T0362-2cyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0330e-164.30e-77
1z54A/T0362-1z54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z54A/T0362-1z54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9399e-161.48e-75
2gf6A/T0362-2gf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gf6A/T0362-2gf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0125e-138.55e-68
2aliA/T0362-2aliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aliA/T0362-2aliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0739e-134.23e-63
1yliA/T0362-1yliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yliA/T0362-1yliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3626e-115.84e-56
1vpmA/T0362-1vpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpmA/T0362-1vpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5847e-101.82e-56
2av9A/T0362-2av9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2av9A/T0362-2av9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4265e-107.04e-71
2essA/T0362-2essA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2essA/T0362-2essA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2856e-092.11e-63
2gvhA/T0362-2gvhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gvhA/T0362-2gvhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0956e-085.20e-43

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001