Best Alignments for T0362

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2cyeA/T0362-2cyeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cyeA/T0362-2cyeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2825e-152.01e-72
1s5uA/T0362-1s5uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s5uA/T0362-1s5uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4287e-152.00e-75 d.38.1.1
1z54A/T0362-1z54A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z54A/T0362-1z54A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9425e-142.29e-71
2av9A/T0362-2av9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2av9A/T0362-2av9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0497e-134.83e-65
2aliA/T0362-2aliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aliA/T0362-2aliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8869e-122.06e-59
2gf6A/T0362-2gf6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gf6A/T0362-2gf6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6998e-121.61e-65
1yliA/T0362-1yliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yliA/T0362-1yliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4551e-111.38e-50
1vpmA/T0362-1vpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpmA/T0362-1vpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7024e-107.62e-53
2essA/T0362-2essA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2essA/T0362-2essA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0287e-103.84e-60
2gvhA/T0362-2gvhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gvhA/T0362-2gvhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0235e-082.11e-38

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001