Best Alignments for T0361

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1f45B/T0361-1f45B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f45B/T0361-1f45B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8306e+009.15e-05 1f45B a.26.1.1
1w33A/T0361-1w33A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w33A/T0361-1w33A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1455e+009.24e-02
2grrB/T0361-2grrB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2grrB/T0361-2grrB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5457e+016.09e-04
1v4eA/T0361-1v4eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v4eA/T0361-1v4eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5832e+011.48e-09 a.128.1.1
1t3wA/T0361-1t3wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t3wA/T0361-1t3wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6015e+011.37e-06
3gcb/T0361-3gcb-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3gcb/T0361-3gcb-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6268e+014.26e-06 3gcb d.3.1.1
1huxA/T0361-1huxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1huxA/T0361-1huxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7234e+014.48e-04 1huxA c.55.1.5
1ll2A/T0361-1ll2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ll2A/T0361-1ll2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9187e+014.10e-02 c.68.1.14
1b3uA/T0361-1b3uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b3uA/T0361-1b3uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0526e+017.76e-03 1b3uA a.118.1.2
1w7jA/T0361-1w7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w7jA/T0361-1w7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1567e+011.82e-07

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001