Best Alignments for T0361

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1f45B/T0361-1f45B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f45B/T0361-1f45B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6108e+009.15e-05 1f45B a.26.1.1
1w33A/T0361-1w33A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w33A/T0361-1w33A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1231e+001.44e+00
1ll2A/T0361-1ll2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ll2A/T0361-1ll2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2411e+004.10e-02 c.68.1.14
2ahqA/T0361-2ahqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ahqA/T0361-2ahqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3793e+002.19e-02
3gcb/T0361-3gcb-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3gcb/T0361-3gcb-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1227e+012.08e-01 3gcb d.3.1.1
1t3wA/T0361-1t3wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t3wA/T0361-1t3wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1841e+011.37e-06
2grrB/T0361-2grrB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2grrB/T0361-2grrB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3353e+013.33e-01
1huxA/T0361-1huxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1huxA/T0361-1huxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5342e+016.52e-01 1huxA c.55.1.5
1ow4A/T0361-1ow4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ow4A/T0361-1ow4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5757e+011.81e-05 a.39.2.1
1oxjA/T0361-1oxjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oxjA/T0361-1oxjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6395e+019.16e-05 a.60.1.2
a.118.1.13

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001