Best Alignments for T0360

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1dvoA/T0360-1dvoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dvoA/T0360-1dvoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5780e-147.79e-40 1dvoA a.136.1.1
1w33A/T0360-1w33A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w33A/T0360-1w33A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3428e+008.16e-18
1z1dA/T0360-1z1dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z1dA/T0360-1z1dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4724e+001.06e-11
1mzbA/T0360-1mzbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mzbA/T0360-1mzbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2935e+001.84e-11 a.4.5.42
2c8mA/T0360-2c8mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c8mA/T0360-2c8mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3080e+001.20e-07
2fswA/T0360-2fswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fswA/T0360-2fswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9483e+001.85e-13
1dpuA/T0360-1dpuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dpuA/T0360-1dpuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2417e+002.06e-12 1dpuA a.4.5.16
1sfxA/T0360-1sfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sfxA/T0360-1sfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6979e+001.54e-17 a.4.5.50
1x8bA/T0360-1x8bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x8bA/T0360-1x8bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8188e+002.08e-03
1iscA/T0360-1iscA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1iscA/T0360-1iscA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9961e+002.39e-10 1avmA a.2.11.1
d.44.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001