Best Alignments for T0360

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1dvoA/T0360-1dvoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dvoA/T0360-1dvoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7322e-132.53e-36 1dvoA a.136.1.1
1dpuA/T0360-1dpuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dpuA/T0360-1dpuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7029e+008.78e-12 1dpuA a.4.5.16
1z1dA/T0360-1z1dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z1dA/T0360-1z1dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7713e+007.27e-11
1mzbA/T0360-1mzbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mzbA/T0360-1mzbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8095e+001.08e-09 a.4.5.42
1w33A/T0360-1w33A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w33A/T0360-1w33A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9505e+007.34e-13
1x8bA/T0360-1x8bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x8bA/T0360-1x8bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3445e+002.08e-03
1yyvA/T0360-1yyvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yyvA/T0360-1yyvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9623e+002.17e-05
2fswA/T0360-2fswA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fswA/T0360-2fswA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1846e+006.52e-08
1ykhB/T0360-1ykhB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ykhB/T0360-1ykhB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5880e+001.56e-10
2arsA/T0360-2arsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2arsA/T0360-2arsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6992e+001.10e-07

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001