Best Alignments for T0359

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fe5A/T0359-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe5A/T0359-2fe5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7711e-163.88e-60
1g9oA/T0359-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g9oA/T0359-1g9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1078e-163.18e-61 1pdr b.36.1.1
2fneA/T0359-2fneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fneA/T0359-2fneA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7686e-165.40e-60
1tp5A/T0359-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp5A/T0359-1tp5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1021e-162.01e-58
2fcfA/T0359-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fcfA/T0359-2fcfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4019e-151.03e-55
2h3lA/T0359-2h3lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h3lA/T0359-2h3lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9423e-143.82e-51
2h2bA/T0359-2h2bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h2bA/T0359-2h2bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8081e-148.82e-51
1wf7A/T0359-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wf7A/T0359-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8589e-133.64e-45
1n99A/T0359-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n99A/T0359-1n99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3849e-136.75e-46 b.36.1.1
b.36.1.1
2f0aA/T0359-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f0aA/T0359-2f0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7751e-132.32e-47

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001