Best Alignments for T0359

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fneA/T0359-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fneA/T0359-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9921e-168.24e-63
2fe5A/T0359-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe5A/T0359-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4136e-158.52e-58
1tp5A/T0359-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp5A/T0359-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1396e-153.08e-59
1g9oA/T0359-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g9oA/T0359-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5985e-158.41e-62 1pdr b.36.1.1
2fcfA/T0359-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fcfA/T0359-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3037e-144.34e-57
1qavA/T0359-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qavA/T0359-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5675e-149.61e-61 1qauA b.36.1.1
2h2bA/T0359-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h2bA/T0359-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6156e-136.37e-54
2h3lA/T0359-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h3lA/T0359-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2238e-125.08e-53
2f0aA/T0359-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f0aA/T0359-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4530e-127.52e-49
2f5yA/T0359-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f5yA/T0359-2f5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9006e-121.17e-54

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001