Best Alignments for T0358

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f4qA/T0358-2f4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f4qA/T0358-2f4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1687e-015.75e-08
1yaxA/T0358-1yaxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yaxA/T0358-1yaxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4655e+008.27e-07
2a2pA/T0358-2a2pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2pA/T0358-2a2pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8323e+008.82e-10
1lktA/T0358-1lktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lktA/T0358-1lktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9635e+004.05e-04 1lktA b.90.1.1
1vq2A/T0358-1vq2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vq2A/T0358-1vq2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2843e+001.37e-08
2c3vA/T0358-2c3vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c3vA/T0358-2c3vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3511e+009.00e-02
1tp6A/T0358-1tp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp6A/T0358-1tp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9312e+005.23e-03 d.17.4.12
1zkdA/T0358-1zkdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zkdA/T0358-1zkdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9927e+001.03e-04
1ffyA/T0358-1ffyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ffyA/T0358-1ffyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0479e+003.94e+01 1qu2A a.27.1.1
b.51.1.1
c.26.1.1
1iscA/T0358-1iscA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1iscA/T0358-1iscA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2066e+006.87e-07 1avmA a.2.11.1
d.44.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001