Best Alignments for T0358

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f4qA/T0358-2f4qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f4qA/T0358-2f4qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6020e-012.34e-05
1iscA/T0358-1iscA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1iscA/T0358-1iscA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3498e+006.87e-07 1avmA a.2.11.1
d.44.1.1
1yaxA/T0358-1yaxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yaxA/T0358-1yaxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5822e+002.52e-06
1tp6A/T0358-1tp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp6A/T0358-1tp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4083e+005.23e-03 d.17.4.12
1vjfA/T0358-1vjfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjfA/T0358-1vjfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0522e+004.62e-05 d.116.1.1
1v74A/T0358-1v74A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v74A/T0358-1v74A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0531e+003.01e-06 d.243.1.1
1lktA/T0358-1lktA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lktA/T0358-1lktA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4712e+001.23e-02 1lktA b.90.1.1
1iow/T0358-1iow-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1iow/T0358-1iow-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1469e+002.27e-07 1iow c.30.1.2
d.142.1.1
1vq2A/T0358-1vq2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vq2A/T0358-1vq2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5102e+004.29e-06
1zorA/T0358-1zorA-t2k-local-adpstyle1.a2m 1zorA/T0358-1zorA-t2k-local-adpstyle1.al 8.5565e+007.56e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001