Best Alignments for T0358

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f4qA/T0358-2f4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f4qA/T0358-2f4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0542e-015.75e-08
2a2pA/T0358-2a2pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2pA/T0358-2a2pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0735e-015.03e-09
1yaxA/T0358-1yaxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yaxA/T0358-1yaxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0122e+008.27e-07
1vq2A/T0358-1vq2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vq2A/T0358-1vq2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9404e+004.06e-08
1lktA/T0358-1lktA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lktA/T0358-1lktA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8484e+006.53e-03 1lktA b.90.1.1
2cr5A/T0358-2cr5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cr5A/T0358-2cr5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4557e+002.84e-06
1zkdA/T0358-1zkdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zkdA/T0358-1zkdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9760e+001.03e-04
2c3vA/T0358-2c3vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c3vA/T0358-2c3vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9401e+002.42e-01
1yx1A/T0358-1yx1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yx1A/T0358-1yx1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8693e+001.73e-03
1ttzA/T0358-1ttzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ttzA/T0358-1ttzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6214e+003.14e-06 c.47.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001