Best Alignments for T0358

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f4qA/T0358-2f4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f4qA/T0358-2f4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0420e-011.54e-07
1zorA/T0358-1zorA-t06-global-adpstyle1.a2m 1zorA/T0358-1zorA-t06-global-adpstyle1.al 5.0749e-018.28e-02
2eql/3lzt-T0358-fssp-local-adpstyle5.a2m 2eql/3lzt-T0358-fssp-local-adpstyle5.al 8.2698e-015.37e+02 3lzt d.2.1.2
2h94A/T0358-2h94A-t06-local-adpstyle1.a2m 2h94A/T0358-2h94A-t06-local-adpstyle1.al 1.7903e+004.45e+00
1lomA/T0358-1lomA-t06-global-adpstyle1.a2m 1lomA/T0358-1lomA-t06-global-adpstyle1.al 2.5982e+004.61e-01 b.89.1.1
1lktA/T0358-1lktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lktA/T0358-1lktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8232e+005.67e-04 1lktA b.90.1.1
2cwiA/T0358-2cwiA-t06-local-adpstyle1.a2m 2cwiA/T0358-2cwiA-t06-local-adpstyle1.al 3.2246e+008.68e+00
1v9lA/T0358-1v9lA-t04-global-adpstyle1.a2m 1v9lA/T0358-1v9lA-t04-global-adpstyle1.al 3.3889e+006.07e-01
1tp6A/T0358-1tp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp6A/T0358-1tp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4372e+006.11e-03 d.17.4.12
2c3vA/T0358-2c3vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c3vA/T0358-2c3vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5135e+007.94e-02

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001