Best Alignments for T0358

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f4qA/T0358-2f4qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f4qA/T0358-2f4qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7756e-011.11e-05
1zorA/T0358-1zorA-t2k-local-adpstyle1.a2m 1zorA/T0358-1zorA-t2k-local-adpstyle1.al 1.4839e+001.47e+00
2eql/T0358-2eql-t2k-local-adpstyle1.a2m 2eql/T0358-2eql-t2k-local-adpstyle1.al 2.4641e+003.18e+00 3lzt d.2.1.2
1tp6A/T0358-1tp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp6A/T0358-1tp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1983e+006.11e-03 d.17.4.12
1lktA/T0358-1lktA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lktA/T0358-1lktA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2651e+001.48e-02 1lktA b.90.1.1
2h94A/T0358-2h94A-t2k-local-adpstyle1.a2m 2h94A/T0358-2h94A-t2k-local-adpstyle1.al 3.8032e+006.06e+00
1isaA/T0358-1isaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1isaA/T0358-1isaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7348e+009.05e-08 1avmA a.2.11.1
d.44.1.1
2cwiA/T0358-2cwiA-t2k-local-adpstyle1.a2m 2cwiA/T0358-2cwiA-t2k-local-adpstyle1.al 6.2303e+001.24e+01
2c3vA/T0358-2c3vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c3vA/T0358-2c3vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3869e+001.24e+00
1yaxA/T0358-1yaxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yaxA/T0358-1yaxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4177e+001.38e-06

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001