Best Alignments for T0358

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f4qA/T0358-2f4qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f4qA/T0358-2f4qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0504e-019.69e-06
1zorA/T0358-1zorA-t06-global-adpstyle1.a2m 1zorA/T0358-1zorA-t06-global-adpstyle1.al 1.4688e+008.28e-02
2c3vA/T0358-2c3vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c3vA/T0358-2c3vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4530e+007.94e-02
1lktA/T0358-1lktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lktA/T0358-1lktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5805e+005.67e-04 1lktA b.90.1.1
1tp6A/T0358-1tp6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp6A/T0358-1tp6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6484e+004.18e+01 d.17.4.12
1yaxA/T0358-1yaxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yaxA/T0358-1yaxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8894e+001.24e-06
2h94A/T0358-2h94A-t06-local-adpstyle1.a2m 2h94A/T0358-2h94A-t06-local-adpstyle1.al 4.2239e+004.45e+00
1bb3A/T0358-1bb3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bb3A/T0358-1bb3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6100e+002.40e+02 3lzt d.2.1.2
1ffyA/T0358-1ffyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ffyA/T0358-1ffyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1068e+005.93e+00 1qu2A a.27.1.1
b.51.1.1
c.26.1.1
1lomA/T0358-1lomA-t06-global-adpstyle1.a2m 1lomA/T0358-1lomA-t06-global-adpstyle1.al 5.2488e+004.61e-01 b.89.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001