Best Alignments for T0358

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f4qA/T0358-2f4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f4qA/T0358-2f4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5391e-011.54e-07
1zorA/T0358-1zorA-t04-global-adpstyle1.a2m 1zorA/T0358-1zorA-t04-global-adpstyle1.al 1.4349e+001.60e-01
1lktA/T0358-1lktA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lktA/T0358-1lktA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8261e+001.51e-02 1lktA b.90.1.1
2c3vA/T0358-2c3vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c3vA/T0358-2c3vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1160e+004.10e-01
1tp6A/T0358-1tp6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp6A/T0358-1tp6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5732e+001.42e+00 d.17.4.12
1yaxA/T0358-1yaxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yaxA/T0358-1yaxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6938e+002.29e-07
2h94A/T0358-2h94A-t04-local-adpstyle1.a2m 2h94A/T0358-2h94A-t04-local-adpstyle1.al 4.2016e+006.25e+00
1bb3A/T0358-1bb3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bb3A/T0358-1bb3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3100e+006.49e+01 3lzt d.2.1.2
1lomA/T0358-1lomA-t04-global-adpstyle1.a2m 1lomA/T0358-1lomA-t04-global-adpstyle1.al 5.0628e+008.20e-01 b.89.1.1
1v9lA/T0358-1v9lA-t04-global-adpstyle1.a2m 1v9lA/T0358-1v9lA-t04-global-adpstyle1.al 5.4869e+006.07e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001