Best Alignments for T0357

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1v7lA/T0357-1v7lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v7lA/T0357-1v7lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9134e-028.68e-14
2d13A/T0357-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0357-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8363e+003.80e-08
2etlA/T0357-2etlA-t06-global-adpstyle1.a2m 2etlA/T0357-2etlA-t06-global-adpstyle1.al 8.1130e+002.22e-01
1qdlB/T0357-1qdlB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qdlB/T0357-1qdlB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4587e+004.77e+00 1qdlB c.23.16.1
2g74A/T0357-2g74A-t06-global-adpstyle1.a2m 2g74A/T0357-2g74A-t06-global-adpstyle1.al 8.4686e+003.32e-03
1x83A/T0357-1x83A-t06-global-adpstyle1.a2m 1x83A/T0357-1x83A-t06-global-adpstyle1.al 8.5442e+005.09e-04
1vi4A/T0357-1vi4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vi4A/T0357-1vi4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9078e+003.62e-05 c.8.7.1
1vbkA/T0357-1vbkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vbkA/T0357-1vbkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6340e+002.43e-05
1hx3A/1i9aA-T0357-fssp-local-adpstyle5.a2m 1hx3A/1i9aA-T0357-fssp-local-adpstyle5.al 1.0138e+015.38e+03 1i9aA d.113.1.2
1rxyA/T0357-1rxyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxyA/T0357-1rxyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1388e+018.17e-05 c.56.2.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001