Best Alignments for T0357

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1v7lA/T0357-1v7lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v7lA/T0357-1v7lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1185e-011.88e-11
1qdlB/T0357-1qdlB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qdlB/T0357-1qdlB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8663e+001.67e+01 1qdlB c.23.16.1
1vi4A/T0357-1vi4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vi4A/T0357-1vi4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1842e+003.62e-05 c.8.7.1
1vbkA/T0357-1vbkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vbkA/T0357-1vbkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7283e+002.43e-05
1efaA/T0357-1efaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1efaA/T0357-1efaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3151e+018.87e-03 1tlfA a.35.1.5
c.93.1.1
1qmeA/T0357-1qmeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qmeA/T0357-1qmeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3789e+017.62e-02 1pmd d.11.1.1
d.11.1.1
d.175.1.1
e.3.1.1
2etlA/T0357-2etlA-t2k-global-adpstyle1.a2m 2etlA/T0357-2etlA-t2k-global-adpstyle1.al 1.4537e+011.74e+00
1rxyA/T0357-1rxyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxyA/T0357-1rxyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4760e+013.80e+00 c.56.2.1
2f1dA/T0357-2f1dA-t2k-local-adpstyle1.a2m 2f1dA/T0357-2f1dA-t2k-local-adpstyle1.al 1.5204e+019.60e+00
1jbkA/T0357-1jbkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jbkA/T0357-1jbkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6421e+011.94e-02 c.37.1.20

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001