Best Alignments for T0357

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1v7lA/T0357-1v7lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v7lA/T0357-1v7lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9932e-028.68e-14
2d13A/T0357-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0357-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5928e+003.80e-08
1i9aA/T0357-1i9aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i9aA/T0357-1i9aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4200e+005.97e+03 1i9aA d.113.1.2
1vi4A/T0357-1vi4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vi4A/T0357-1vi4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7730e+007.94e-04 c.8.7.1
2bsxA/T0357-2bsxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bsxA/T0357-2bsxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1911e+001.78e-05
2gp4A/T0357-2gp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gp4A/T0357-2gp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6252e+001.37e-08
1p3rA/T0357-1p3rA-t06-local-adpstyle1.a2m 1p3rA/T0357-1p3rA-t06-local-adpstyle1.al 9.3450e+004.56e+00 b.55.1.2
1rxyA/T0357-1rxyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxyA/T0357-1rxyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4649e+001.39e-04 c.56.2.1
1nbwA/T0357-1nbwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nbwA/T0357-1nbwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5510e+001.24e+02 c.8.6.1
c.55.1.6
c.55.1.6
1bg6/T0357-1bg6-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bg6/T0357-1bg6-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7008e+007.12e-08 1bg6 a.100.1.5
c.2.1.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001