Best Alignments for T0357

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1v7lA/T0357-1v7lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v7lA/T0357-1v7lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3298e-011.77e-07
2gp4A/T0357-2gp4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gp4A/T0357-2gp4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1290e-017.57e-06
1zvyA/T0357-1zvyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zvyA/T0357-1zvyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9790e+006.58e+00
1kqfA/T0357-1kqfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kqfA/T0357-1kqfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9696e+003.35e-02 b.52.2.2
c.81.1.1
1q7hA/T0357-1q7hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7hA/T0357-1q7hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2779e+001.65e-01 b.122.1.1
d.17.6.2
3ullA/T0357-3ullA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ullA/T0357-3ullA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7262e+002.73e-03 3ullA b.40.4.3
1i21A/T0357-1i21A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i21A/T0357-1i21A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0560e+011.06e+01 1i21A d.108.1.1
2cp5A/T0357-2cp5A-simplesw-adpstyle1.a2m 2cp5A/T0357-2cp5A-simplesw-adpstyle1.al 1.0583e+013.24e+01
1zeqX/T0357-1zeqX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zeqX/T0357-1zeqX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2741e+011.67e-02
1vs0A/T0357-1vs0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vs0A/T0357-1vs0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2964e+019.47e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001