Best Alignments for T0357

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1v7lA/T0357-1v7lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v7lA/T0357-1v7lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0536e-011.74e-05
2gp4A/T0357-2gp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gp4A/T0357-2gp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4411e-011.04e-04
1zvyA/T0357-1zvyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zvyA/T0357-1zvyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7614e+001.28e+01
1kqfA/T0357-1kqfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kqfA/T0357-1kqfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6290e+002.55e-01 b.52.2.2
c.81.1.1
3ullA/T0357-3ullA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ullA/T0357-3ullA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9082e+003.20e-03 3ullA b.40.4.3
1q7hA/T0357-1q7hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7hA/T0357-1q7hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8971e+001.65e-01 b.122.1.1
d.17.6.2
1kblA/T0357-1kblA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kblA/T0357-1kblA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0621e+002.39e-02 c.1.12.2
c.8.1.1
d.142.1.5
1vs0A/T0357-1vs0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vs0A/T0357-1vs0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1705e+009.47e-01
1o54A/T0357-1o54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o54A/T0357-1o54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3250e+008.07e-04 c.66.1.13
1zeqX/T0357-1zeqX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zeqX/T0357-1zeqX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9891e+001.67e-02

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001