Best Alignments for T0357

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1v7lA/T0357-1v7lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v7lA/T0357-1v7lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7437e-019.43e-07
2gp4A/T0357-2gp4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gp4A/T0357-2gp4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1805e+004.25e-03
1zvyA/T0357-1zvyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zvyA/T0357-1zvyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2759e+006.58e+00
1kqfA/T0357-1kqfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kqfA/T0357-1kqfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9717e+003.35e-02 b.52.2.2
c.81.1.1
3ullA/T0357-3ullA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3ullA/T0357-3ullA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8736e+002.73e-03 3ullA b.40.4.3
1o54A/T0357-1o54A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o54A/T0357-1o54A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2033e+001.52e-04 c.66.1.13
1q7hA/T0357-1q7hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7hA/T0357-1q7hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8656e+001.43e+01 b.122.1.1
d.17.6.2
1vs0A/T0357-1vs0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vs0A/T0357-1vs0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1763e+016.24e+00
1zeqX/T0357-1zeqX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zeqX/T0357-1zeqX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2414e+011.13e-01
1iz6A/T0357-1iz6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1iz6A/T0357-1iz6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2735e+015.16e-03 b.34.5.2
b.40.4.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001