Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wqaA/T0356-1wqaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wqaA/T0356-1wqaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1828e+001.01e-04
2gj8A/T0356-2gj8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gj8A/T0356-2gj8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4551e+005.40e-09
2lbd/T0356-2lbd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2lbd/T0356-2lbd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2286e+008.54e-04 2lbd a.123.1.1
1pvvA/T0356-1pvvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pvvA/T0356-1pvvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1875e+018.82e-08 c.78.1.1
c.78.1.1
1ri7A/T0356-1ri7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ri7A/T0356-1ri7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2532e+011.98e-07 a.4.5.32
d.58.4.2
1e9rA/T0356-1e9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e9rA/T0356-1e9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3638e+013.45e-06 c.37.1.11
2dbbA/T0356-2dbbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dbbA/T0356-2dbbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5138e+011.56e-08
2u1a/T0356-2u1a-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2u1a/T0356-2u1a-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5312e+019.44e-06 2u1a d.58.7.1
1w1wA/T0356-1w1wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w1wA/T0356-1w1wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6561e+011.08e-06
2al2A/T0356-2al2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al2A/T0356-2al2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7951e+016.34e-05

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001