Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wqaA/T0356-1wqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wqaA/T0356-1wqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5390e+002.73e-03
2gj8A/T0356-2gj8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gj8A/T0356-2gj8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7821e+005.40e-09
1fcyA/T0356-1fcyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fcyA/T0356-1fcyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2592e+003.52e-02 2lbd a.123.1.1
1e9rA/T0356-1e9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e9rA/T0356-1e9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8004e+003.45e-06 c.37.1.11
1pvvA/T0356-1pvvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pvvA/T0356-1pvvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0344e+011.72e-07 c.78.1.1
c.78.1.1
2dbbA/T0356-2dbbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dbbA/T0356-2dbbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2934e+011.56e-08
2al2A/T0356-2al2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al2A/T0356-2al2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4179e+014.32e-04
2al1A/T0356-2al1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al1A/T0356-2al1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4249e+015.17e-05
1oneA/T0356-1oneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oneA/T0356-1oneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4260e+018.72e-05 4enl c.1.11.1
d.54.1.1
1wdtA/T0356-1wdtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wdtA/T0356-1wdtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6826e+012.22e-05

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001