Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wqaA/T0356-1wqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wqaA/T0356-1wqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5683e+003.30e-05
1fcyA/T0356-1fcyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fcyA/T0356-1fcyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6613e+011.22e-03 2lbd a.123.1.1
2dbbA/T0356-2dbbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dbbA/T0356-2dbbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9730e+014.70e-09
1pvvA/T0356-1pvvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pvvA/T0356-1pvvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1832e+013.56e-07 c.78.1.1
c.78.1.1
1bqk/T0356-1bqk-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bqk/T0356-1bqk-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3796e+013.38e-05 1bqk b.6.1.1
1e9rA/T0356-1e9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e9rA/T0356-1e9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3995e+019.66e-07 c.37.1.11
2g5cA/T0356-2g5cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g5cA/T0356-2g5cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4264e+013.68e-09
1odkA/T0356-1odkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1odkA/T0356-1odkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4800e+017.52e-14 c.56.2.1
1wduA/T0356-1wduA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wduA/T0356-1wduA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5374e+016.64e-08 d.151.1.1
1kt6A/T0356-1kt6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kt6A/T0356-1kt6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6458e+011.26e-08 b.60.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001