Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wduA/T0356-1wduA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wduA/T0356-1wduA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1614e+006.64e-08 d.151.1.1
2g5cA/T0356-2g5cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g5cA/T0356-2g5cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3811e+003.68e-09
1pvvA/T0356-1pvvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pvvA/T0356-1pvvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5273e+006.14e-07 c.78.1.1
c.78.1.1
1w1wA/T0356-1w1wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w1wA/T0356-1w1wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1196e+005.27e-06
2lbd/T0356-2lbd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2lbd/T0356-2lbd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0154e+014.12e-04 2lbd a.123.1.1
1ri7A/T0356-1ri7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ri7A/T0356-1ri7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1570e+013.63e-07 a.4.5.32
d.58.4.2
2dbbA/T0356-2dbbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dbbA/T0356-2dbbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5985e+011.18e-04
1wqaA/T0356-1wqaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wqaA/T0356-1wqaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6859e+017.74e+02
1odkA/T0356-1odkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1odkA/T0356-1odkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9003e+011.24e-08 c.56.2.1
1jmtA/T0356-1jmtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jmtA/T0356-1jmtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9952e+014.37e-06 d.58.7.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001