Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wqaA/T0356-1wqaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wqaA/T0356-1wqaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9711e+005.85e-05
1i35A/T0356-1i35A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i35A/T0356-1i35A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0300e+012.59e+02 d.15.1.5
2lbd/T0356-2lbd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2lbd/T0356-2lbd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7100e+012.77e-02 2lbd a.123.1.1
1w1wA/T0356-1w1wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w1wA/T0356-1w1wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9274e+014.52e-07
1d8wA/T0356-1d8wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d8wA/T0356-1d8wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1555e+012.20e-11 1de5A c.1.15.2
1xwyA/T0356-1xwyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xwyA/T0356-1xwyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1805e+016.80e-11
1dar/T0356-1dar-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dar/T0356-1dar-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2667e+012.12e-07 1dar b.43.3.1
c.37.1.8
d.14.1.1
d.58.11.1
1aszB/T0356-1aszB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aszB/T0356-1aszB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4208e+018.11e-08 1b8aA b.40.4.1
d.104.1.1
1e9rA/T0356-1e9rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e9rA/T0356-1e9rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5433e+017.10e-04 c.37.1.11
1bqk/T0356-1bqk-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bqk/T0356-1bqk-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5688e+011.50e-03 1bqk b.6.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001