Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ejeA/T0356-1ejeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ejeA/T0356-1ejeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8176e-012.06e-20 1ejeA b.45.1.2
1ejbA/T0356-1ejbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ejbA/T0356-1ejbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9911e+002.77e-04 1rvv1 c.16.1.1
1pjcA/T0356-1pjcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pjcA/T0356-1pjcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2304e+002.19e-06 1sayA c.2.1.4
c.23.12.2
1o2dA/T0356-1o2dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o2dA/T0356-1o2dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1769e+001.64e-09 e.22.1.2
1tbd/T0356-1tbd-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tbd/T0356-1tbd-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2721e+006.39e-08 2tbd d.89.1.1
1k4mA/T0356-1k4mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k4mA/T0356-1k4mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1516e+018.95e-03 c.26.1.3
1r88A/T0356-1r88A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r88A/T0356-1r88A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4892e+019.24e-04 c.69.1.3
1fjgP/T0356-1fjgP-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fjgP/T0356-1fjgP-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8658e+013.19e-01 1emwA d.27.1.1
1ko3A/T0356-1ko3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ko3A/T0356-1ko3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9220e+011.10e-07 d.157.1.1
2fiqA/T0356-2fiqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fiqA/T0356-2fiqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3866e+012.52e-04

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001