Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ejeA/T0356-1ejeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ejeA/T0356-1ejeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1693e-014.94e-18 1ejeA b.45.1.2
1nt4A/T0356-1nt4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nt4A/T0356-1nt4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1395e+002.83e-05 c.60.1.2
1tbd/T0356-1tbd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tbd/T0356-1tbd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4013e+002.54e-07 2tbd d.89.1.1
1pjcA/T0356-1pjcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pjcA/T0356-1pjcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7339e+004.69e-05 1sayA c.2.1.4
c.23.12.2
1o2dA/T0356-1o2dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o2dA/T0356-1o2dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2708e+009.90e-09 e.22.1.2
1k1gA/T0356-1k1gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k1gA/T0356-1k1gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0100e+013.26e+00 d.51.1.1
1r88A/T0356-1r88A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r88A/T0356-1r88A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0308e+019.24e-04 c.69.1.3
1k4mA/T0356-1k4mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k4mA/T0356-1k4mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2358e+018.95e-03 c.26.1.3
1ejbA/T0356-1ejbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ejbA/T0356-1ejbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2897e+012.72e-03 1rvv1 c.16.1.1
1o8uA/T0356-1o8uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o8uA/T0356-1o8uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6157e+014.45e-05 c.14.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001