Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1w1wA/T0356-1w1wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w1wA/T0356-1w1wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3230e+001.47e-04
1wqaA/T0356-1wqaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wqaA/T0356-1wqaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5322e+001.47e+04
2u1a/T0356-2u1a-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2u1a/T0356-2u1a-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0762e+009.27e-05 2u1a d.58.7.1
1ejeA/T0356-1ejeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ejeA/T0356-1ejeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0476e+002.05e-17 1ejeA b.45.1.2
1vjeA/T0356-1vjeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjeA/T0356-1vjeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2818e+003.77e-12 d.185.1.2
1lvaA/T0356-1lvaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lvaA/T0356-1lvaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1990e+011.80e-06 a.4.5.35
a.4.5.35
a.4.5.35
a.4.5.35
1q7zA/T0356-1q7zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7zA/T0356-1q7zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2128e+011.70e-13 c.1.21.2
c.1.26.1
1oz9A/T0356-1oz9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oz9A/T0356-1oz9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2627e+011.17e-02 d.92.1.15
1aisB/T0356-1aisB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aisB/T0356-1aisB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3959e+015.33e-09 1aisB a.74.1.2
a.74.1.2
2fbiA/T0356-2fbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0356-2fbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4213e+012.02e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001