Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wqaA/T0356-1wqaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wqaA/T0356-1wqaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0480e+007.41e-01
1w1wA/T0356-1w1wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w1wA/T0356-1w1wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8997e+002.05e-07
1q7zA/T0356-1q7zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7zA/T0356-1q7zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1725e+003.69e-17 c.1.21.2
c.1.26.1
1e9rA/T0356-1e9rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e9rA/T0356-1e9rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8685e+003.01e-02 c.37.1.11
1o6jA/T0356-1o6jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o6jA/T0356-1o6jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0700e+002.68e-02 c.47.1.10
1vheA/T0356-1vheA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vheA/T0356-1vheA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5593e+004.04e-11 b.49.3.1
c.56.5.4
2f5gA/T0356-2f5gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f5gA/T0356-2f5gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0901e+011.09e-06
1o2dA/T0356-1o2dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o2dA/T0356-1o2dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0990e+011.38e-11 e.22.1.2
1sviA/T0356-1sviA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sviA/T0356-1sviA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1626e+015.46e-13 c.37.1.8
1ejeA/T0356-1ejeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ejeA/T0356-1ejeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2069e+014.45e-17 1ejeA b.45.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001