Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fcr/T0356-2fcr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fcr/T0356-2fcr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5422e-011.44e-03 1rcf c.23.5.1
1aisB/T0356-1aisB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aisB/T0356-1aisB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8520e+003.01e-07 1aisB a.74.1.2
a.74.1.2
1o2dA/T0356-1o2dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o2dA/T0356-1o2dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0291e+008.57e-06 e.22.1.2
1fmcA/T0356-1fmcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fmcA/T0356-1fmcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1421e+002.04e-12 1cydA c.2.1.2
1xx6A/T0356-1xx6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xx6A/T0356-1xx6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3572e+001.57e+00
1xn7A/T0356-1xn7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xn7A/T0356-1xn7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5664e+002.67e-04
1lvaA/T0356-1lvaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lvaA/T0356-1lvaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1992e+003.42e-08 a.4.5.35
a.4.5.35
a.4.5.35
a.4.5.35
1srvA/T0356-1srvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1srvA/T0356-1srvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2096e+007.23e-07 1derA c.8.5.1
1lddA/T0356-1lddA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lddA/T0356-1lddA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3755e+002.83e-04 a.4.5.34
1z15A/T0356-1z15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z15A/T0356-1z15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7143e+003.91e-09

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001