Best Alignments for T0355

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vh7A/T0355-1vh7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vh7A/T0355-1vh7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5976e-071.67e-53 c.1.2.1
1rd5A/T0355-1rd5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rd5A/T0355-1rd5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3770e-071.50e-48
1qopA/T0355-1qopA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qopA/T0355-1qopA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4786e-069.71e-46 2tysA c.1.2.4
1xi3A/T0355-1xi3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xi3A/T0355-1xi3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9223e-066.88e-48 c.1.3.1
2f6uA/T0355-2f6uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6uA/T0355-2f6uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3969e-063.64e-48
1vzwA/T0355-1vzwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vzwA/T0355-1vzwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2506e-051.22e-51
1vizA/T0355-1vizA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vizA/T0355-1vizA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1616e-058.69e-50 c.1.4.1
1twdA/T0355-1twdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1twdA/T0355-1twdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4344e-052.98e-47 c.1.30.1
1rpxA/T0355-1rpxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rpxA/T0355-1rpxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3857e-051.96e-38 1rpxA c.1.2.2
1tx2A/T0355-1tx2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tx2A/T0355-1tx2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9635e-053.00e-45 c.1.21.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001