Best Alignments for T0351

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1exrA/T0351-1exrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1exrA/T0351-1exrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3068e+004.43e-07 1cll a.39.1.5
2ahqA/T0351-2ahqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ahqA/T0351-2ahqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1386e+004.39e-06
1yirA/T0351-1yirA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yirA/T0351-1yirA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2337e+006.53e-08
1swvA/T0351-1swvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0351-1swvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1076e+002.14e-03
1fseA/T0351-1fseA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fseA/T0351-1fseA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9507e+004.52e-07 1fseA a.4.6.2
1jl5A/T0351-1jl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jl5A/T0351-1jl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6071e+008.71e-07 c.10.2.6
1xqaA/T0351-1xqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xqaA/T0351-1xqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6790e+006.13e-02
2ap1A/T0351-2ap1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ap1A/T0351-2ap1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4435e+003.15e-02
1z8uA/T0351-1z8uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z8uA/T0351-1z8uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2194e+013.26e-05
1ufiA/T0351-1ufiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ufiA/T0351-1ufiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2246e+014.39e-06 a.30.4.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001