Sequence numbers correspond to the following labels:

1. • T0351 NESG:SR355, Bacillus subtilis, 117 res
2. • gi|2633630|emb|CAB13133.1|_1:109 xkdW [Bacillus subtilis subsp. subtilis str. 168]
   • gi|1225960|emb|CAA94044.1| xkdW [Bacillus subtilis]
   • gi|1722880|sp|P54342|XKDW_BACSU Phage-like element PBSX protein xkdW [Taxonomy]
   • gi|16078341|ref|NP_389159.1| hypothetical protein BSU12760 [Bacillus subtilis subsp. subtilis str. 168]
3. • gi|1303764|dbj|BAA12420.1|_1:110 YqcD [Bacillus subtilis]
   • gi|2635039|emb|CAB14535.1| yqcD [Bacillus subtilis subsp. subtilis str. 168]
   • gi|1176763|sp|P45939|YQCD_BACSU Hypothetical protein yqcD [Taxonomy]
   • gi|16079647|ref|NP_390471.1| hypothetical protein BSU25940 [Bacillus subtilis subsp. subtilis str. 168]
   • gi|1217871|dbj|BAA06956.1| ORF129 [Bacillus subtilis]
4. • gi|46449975|gb|AAS96624.1|_4:118 conserved hypothetical protein [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough]
   • gi|46580556|ref|YP_011364.1| hypothetical protein DVU2151 [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough]
5. • gi|82547645|ref|YP_406416.1|_11:126 gp40 [Listeria bacteriophage P100]
   • gi|66732752|gb|AAY53343.1| gp40 [Listeria bacteriophage P100]
6. • gi|52003167|gb|AAU23109.1|_1:98 phage related protein [Bacillus licheniformis ATCC 14580]
   • gi|52347830|gb|AAU40464.1| putative protein [Bacillus licheniformis DSM 13]
   • gi|52079956|ref|YP_078747.1| phage related protein [Bacillus licheniformis ATCC 14580]
   • gi|52785328|ref|YP_091157.1| hypothetical protein BLi01564 [Bacillus licheniformis ATCC 14580]
7. • gi|9630250|ref|NP_046677.1|_18:104 similar to Bacillus subtilis PBSX prophage XkdW [Bacteriophage SPBc2]
   • gi|2634435|emb|CAB13934.1| yorD [Bacillus subtilis subsp. subtilis str. 168]
   • gi|3025603|gb|AAC13098.1| similar to Bacillus subtilis PBSX prophage XkdW [Bacteriophage SPBc2]
   • gi|56405126|sp|P68576|SCP1_BPSPC Stress response protein SCP1 [Taxonomy]
   • gi|56405125|sp|P68575|SCP1_BACSU SPBc2 prophage-derived stress response protein SCP1 [Taxonomy]
   • gi|16079101|ref|NP_389924.1| hypothetical protein BSU20420 [Bacillus subtilis subsp. subtilis str. 168]

                    10        20             30          40        50  
                    |         |              |           |         |  
   1 ...M...ILYDAIMYKYPNAVSRKDF.ELRNDG..NG..SY.IEKWNLR.APLPTQAELETWWEE
   2 ...M...ILYDAIMYKYPNAVSRKDF.ELRNDG..NG..SY.IEKWNLR.APLPTQAELETWWEE
   3 ...M...NIGEAILFKYPTADPTKDF.IVQNNG..DGtpSY.IAEWNIR.APIPTEAELKTWWEE
   4 ...MqneRIYEALRLMFPQADPLIAW.RLEQGPhtGG..QIaITQWNLP.DPQPTQAELDSAYAQ
   5 ldgR...QYVTAVLYMYPNLDPQYDFgVVSSEG..KV..EA.FE-WNVKnITKPSIAQLDQAYKD
   6 ...M...NLALAVKYLFPDAIIGEDF.IIRDDG..DGrgQY.IETWRIS.APQPSEKELQEAWEN
   7 ihgS...ILPEVLMYMFPRSDESYDW.EFVNDN..GR..HI.FTAWRKS.EPIPTLEEIEKAAIE


              60        70         80        90         100       110  
              |         |          |         |           |         |  
   1 LQKN..PPYEPPDQVELLAQELS.QEKLARKQLEELNKTLGN.EL.SDIKLSLLSLKGDYAELEH
   2 LQKN..PPYEPPDQVELLAQELS.QEKLARKQLEELNKTLGN.EL.SDIKLSLLSLKGDYAE---
   3 LQST..SAYEPPVQVDLLARELS.QEKLARKQLEELNQTLGS.EL.SKIKLQLLTLQGGQGS---
   4 LAKI..DRQAQ-IQRELDAIDLQ.SVRPVRAKLAGTATAEDEaKI.AALEAQAQTLRTELADMQK
   5 YVKSigSPSNPPA----LEPEVS.KEASIGKILTEKFSAL-E.EVnANMLLENLELQASLDKTKQ
   6 YLEN..PVTDDP-QLSYTSQQL-.--------LK-----LGR.EM.SSLKLEILALKGEMTNGS-
   7 LEEK..KNAPKPKTLEERVADLEkQVAYLTSKVEGTN-----.--.-------------------


              
             
   1 HHHHH...
   2 -----...
   3 -----...
   4 G----...
   5 QNSELvfe
   6 -----...
   7 -----...