Best Alignments for T0350

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2cnqA/T0350-2cnqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cnqA/T0350-2cnqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5405e+009.10e-06
1t6sA/T0350-1t6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t6sA/T0350-1t6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5775e+003.72e-07
1obdA/T0350-1obdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1obdA/T0350-1obdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6119e+001.20e-05 d.143.1.1
3proC/T0350-3proC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3proC/T0350-3proC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6758e+001.96e-06 3proC d.52.1.1
d.52.1.1
2gu3A/T0350-2gu3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gu3A/T0350-2gu3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3416e+002.65e-10
1s5jA/T0350-1s5jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s5jA/T0350-1s5jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8827e+001.65e-05
1v5xA/T0350-1v5xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v5xA/T0350-1v5xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4964e+005.68e-05 c.1.2.4
1ospO/T0350-1ospO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ospO/T0350-1ospO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8526e+003.57e-07 1ospO b.76.1.1
1aqcA/T0350-1aqcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aqcA/T0350-1aqcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8912e+001.52e-09 1x11A b.55.1.2
1jnyA/T0350-1jnyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jnyA/T0350-1jnyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0928e+012.04e-02 b.43.3.1
b.44.1.1
c.37.1.8

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001