Best Alignments for T0350

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1a48/T0350-1a48-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a48/T0350-1a48-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1738e+006.53e-04 1a48 d.143.1.1
1t6sA/T0350-1t6sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t6sA/T0350-1t6sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4697e+002.56e-06
2cnqA/T0350-2cnqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cnqA/T0350-2cnqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9463e+007.06e-02
3proC/T0350-3proC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3proC/T0350-3proC-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0370e+001.26e-03 3proC d.52.1.1
d.52.1.1
1s5jA/T0350-1s5jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s5jA/T0350-1s5jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2563e+002.94e-05
1aqcA/T0350-1aqcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aqcA/T0350-1aqcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5388e+006.54e-07 1x11A b.55.1.2
2gu3A/T0350-2gu3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gu3A/T0350-2gu3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4218e+008.88e-03
1v5xA/T0350-1v5xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v5xA/T0350-1v5xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6225e+007.24e-03 c.1.2.4
1jnyA/T0350-1jnyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jnyA/T0350-1jnyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7132e+002.04e-02 b.43.3.1
b.44.1.1
c.37.1.8
1a3qA/T0350-1a3qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a3qA/T0350-1a3qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0312e+018.34e-02 1a3qA b.1.18.1
b.2.5.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001