Best Alignments for T0350

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3proC/T0350-3proC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3proC/T0350-3proC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0463e+003.72e-05 3proC d.52.1.1
d.52.1.1
1t6sA/T0350-1t6sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t6sA/T0350-1t6sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5435e+002.32e-06
2cnqA/T0350-2cnqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cnqA/T0350-2cnqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6146e+002.85e-02
1a48/T0350-1a48-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a48/T0350-1a48-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6288e+004.00e-02 1a48 d.143.1.1
2gu3A/T0350-2gu3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gu3A/T0350-2gu3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0168e+003.41e-05
1s5jA/T0350-1s5jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s5jA/T0350-1s5jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3450e+001.65e-05
1v5xA/T0350-1v5xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v5xA/T0350-1v5xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7262e+008.23e-05 c.1.2.4
1ospO/T0350-1ospO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ospO/T0350-1ospO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4346e+003.57e-07 1ospO b.76.1.1
1aqcA/T0350-1aqcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aqcA/T0350-1aqcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1088e+011.95e-07 1x11A b.55.1.2
1zbfA/T0350-1zbfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zbfA/T0350-1zbfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1523e+011.05e+00

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001