PFRMAT RR
TARGET T0348
AUTHOR SAM-T07
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa7str2_7near3nsep5.47.data03.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEA
RELAPEEEVKLEHHHHHH
4 13 0 8 0.400206
4 14 0 8 0.414659
4 20 0 8 0.416051
4 32 0 8 0.388428
4 43 0 8 0.346506
5 14 0 8 0.60348
5 18 0 8 0.802437
5 20 0 8 0.819587
5 27 0 8 0.728683
5 28 0 8 0.635189
5 29 0 8 0.667934
5 32 0 8 0.498667
5 35 0 8 0.564817
5 36 0 8 0.662953
5 38 0 8 0.677311
5 42 0 8 0.498301
5 43 0 8 0.625197
5 44 0 8 0.619378
5 45 0 8 0.625478
5 46 0 8 0.536605
5 50 0 8 0.564214
5 53 0 8 0.527869
5 61 0 8 0.357199
6 15 0 8 0.401368
6 16 0 8 0.416336
6 18 0 8 0.890925
6 19 0 8 0.350225
6 20 0 8 0.883019
6 22 0 8 0.461
6 25 0 8 0.349505
6 26 0 8 0.356491
6 27 0 8 0.830356
6 28 0 8 0.599697
6 29 0 8 0.755189
6 30 0 8 0.346169
6 31 0 8 0.37888
6 32 0 8 0.568204
6 33 0 8 0.36659
6 34 0 8 0.489966
6 35 0 8 0.704119
6 36 0 8 0.705125
6 37 0 8 0.412426
6 38 0 8 0.769888
6 39 0 8 0.356431
6 40 0 8 0.437076
6 41 0 8 0.431723
6 42 0 8 0.653276
6 43 0 8 0.638838
6 44 0 8 0.699417
6 45 0 8 0.711489
6 46 0 8 0.572906
6 50 0 8 0.678949
6 53 0 8 0.681848
6 61 0 8 0.458475
7 18 0 8 0.516085
7 20 0 8 0.606601
7 22 0 8 0.366668
7 27 0 8 0.416575
7 29 0 8 0.464231
7 31 0 8 0.394646
7 32 0 8 0.484898
7 35 0 8 0.422604
7 36 0 8 0.401128
7 38 0 8 0.376445
7 40 0 8 0.362554
7 43 0 8 0.433277
7 44 0 8 0.374584
7 53 0 8 0.363548
8 18 0 8 0.827245
8 20 0 8 0.781777
8 27 0 8 0.729053
8 28 0 8 0.617975
8 29 0 8 0.624502
8 32 0 8 0.479704
8 35 0 8 0.483595
8 36 0 8 0.631081
8 38 0 8 0.680736
8 42 0 8 0.449019
8 43 0 8 0.576831
8 44 0 8 0.541932
8 45 0 8 0.558258
8 46 0 8 0.496129
8 50 0 8 0.512863
8 53 0 8 0.475768
8 61 0 8 0.347903
9 18 0 8 0.924077
9 19 0 8 0.543123
9 20 0 8 0.861359
9 26 0 8 0.370737
9 27 0 8 0.860693
9 28 0 8 0.680057
9 29 0 8 0.709309
9 32 0 8 0.581726
9 33 0 8 0.347849
9 34 0 8 0.495598
9 35 0 8 0.681647
9 36 0 8 0.70433
9 37 0 8 0.389105
9 38 0 8 0.782015
9 39 0 8 0.383226
9 40 0 8 0.382572
9 41 0 8 0.37235
9 42 0 8 0.744676
9 43 0 8 0.805368
9 44 0 8 0.799352
9 45 0 8 0.802278
9 46 0 8 0.67636
9 50 0 8 0.708702
9 53 0 8 0.640008
9 61 0 8 0.423751
10 19 0 8 0.587846
10 20 0 8 0.915989
10 21 0 8 0.435885
10 22 0 8 0.526476
10 24 0 8 0.446333
10 25 0 8 0.48156
10 26 0 8 0.53986
10 27 0 8 0.902268
10 28 0 8 0.781538
10 29 0 8 0.835072
10 30 0 8 0.484536
10 31 0 8 0.498389
10 32 0 8 0.696738
10 33 0 8 0.502153
10 34 0 8 0.61991
10 35 0 8 0.774756
10 36 0 8 0.802885
10 37 0 8 0.538184
10 38 0 8 0.832327
10 39 0 8 0.444939
10 40 0 8 0.528738
10 41 0 8 0.514491
10 42 0 8 0.736211
10 43 0 8 0.7669
10 44 0 8 0.794671
10 45 0 8 0.79504
10 46 0 8 0.680061
10 47 0 8 0.358593
10 49 0 8 0.451703
10 50 0 8 0.778289
10 51 0 8 0.38857
10 53 0 8 0.76094
10 58 0 8 0.440299
10 59 0 8 0.34731
10 61 0 8 0.601216
10 64 0 8 0.433327
10 65 0 8 0.400351
11 20 0 8 0.807228
11 21 0 8 0.37816
11 22 0 8 0.40404
11 24 0 8 0.389698
11 25 0 8 0.455778
11 26 0 8 0.459196
11 27 0 8 0.723144
11 28 0 8 0.671008
11 29 0 8 0.813153
11 30 0 8 0.470498
11 31 0 8 0.469183
11 32 0 8 0.699873
11 33 0 8 0.53847
11 34 0 8 0.547207
11 35 0 8 0.615347
11 36 0 8 0.658708
11 37 0 8 0.491347
11 38 0 8 0.682549
11 39 0 8 0.416216
11 40 0 8 0.497088
11 41 0 8 0.440712
11 42 0 8 0.553999
11 43 0 8 0.571895
11 44 0 8 0.627119
11 45 0 8 0.592142
11 46 0 8 0.59802
11 47 0 8 0.389356
11 49 0 8 0.44127
11 50 0 8 0.608268
11 53 0 8 0.569773
11 61 0 8 0.388368
12 21 0 8 0.439848
12 22 0 8 0.569865
12 23 0 8 0.373804
12 24 0 8 0.543611
12 25 0 8 0.542428
12 26 0 8 0.534124
12 27 0 8 0.668852
12 28 0 8 0.596132
12 29 0 8 0.808343
12 30 0 8 0.594045
12 31 0 8 0.603387
12 32 0 8 0.683485
12 33 0 8 0.559462
12 34 0 8 0.556007
12 35 0 8 0.603219
12 36 0 8 0.579112
12 37 0 8 0.503708
12 38 0 8 0.616513
12 39 0 8 0.427723
12 40 0 8 0.517951
12 41 0 8 0.53481
12 42 0 8 0.521659
12 43 0 8 0.526542
12 44 0 8 0.539382
12 45 0 8 0.516835
12 46 0 8 0.481858
12 47 0 8 0.389267
12 49 0 8 0.424865
12 50 0 8 0.544623
12 51 0 8 0.379016
12 53 0 8 0.518925
12 61 0 8 0.394137
12 64 0 8 0.393694
12 65 0 8 0.391245
13 22 0 8 0.493647
13 24 0 8 0.499817
13 25 0 8 0.522835
13 26 0 8 0.47061
13 27 0 8 0.660603
13 28 0 8 0.648079
13 29 0 8 0.83474
13 30 0 8 0.579409
13 31 0 8 0.57963
13 32 0 8 0.733437
13 33 0 8 0.611265
13 34 0 8 0.506705
13 35 0 8 0.587052
13 36 0 8 0.644362
13 37 0 8 0.549888
13 38 0 8 0.623237
13 39 0 8 0.44614
13 40 0 8 0.536144
13 41 0 8 0.487524
13 42 0 8 0.528584
13 43 0 8 0.624294
13 44 0 8 0.637066
13 45 0 8 0.571707
13 46 0 8 0.559458
13 47 0 8 0.418829
13 48 0 8 0.34972
13 49 0 8 0.473881
13 50 0 8 0.560745
13 51 0 8 0.390777
13 53 0 8 0.481703
13 61 0 8 0.348807
13 64 0 8 0.364387
13 65 0 8 0.372725
14 24 0 8 0.47949
14 25 0 8 0.544402
14 26 0 8 0.442865
14 27 0 8 0.78959
14 28 0 8 0.756984
14 29 0 8 0.894071
14 30 0 8 0.66852
14 31 0 8 0.524448
14 32 0 8 0.761241
14 33 0 8 0.685202
14 34 0 8 0.57127
14 35 0 8 0.631868
14 36 0 8 0.737383
14 37 0 8 0.597108
14 38 0 8 0.7292
14 39 0 8 0.487601
14 40 0 8 0.569313
14 41 0 8 0.488751
14 42 0 8 0.586739
14 43 0 8 0.711303
14 44 0 8 0.731511
14 45 0 8 0.679724
14 46 0 8 0.682101
14 47 0 8 0.490813
14 48 0 8 0.38311
14 49 0 8 0.515531
14 50 0 8 0.672307
14 51 0 8 0.418356
14 53 0 8 0.581864
14 61 0 8 0.402254
14 64 0 8 0.378179
14 65 0 8 0.373335
15 24 0 8 0.45361
15 25 0 8 0.454718
15 26 0 8 0.444479
15 27 0 8 0.484728
15 28 0 8 0.553444
15 29 0 8 0.700363
15 30 0 8 0.598064
15 31 0 8 0.507044
15 32 0 8 0.634019
15 33 0 8 0.541221
15 34 0 8 0.449894
15 35 0 8 0.461436
15 36 0 8 0.483912
15 37 0 8 0.451121
15 38 0 8 0.438105
15 39 0 8 0.415539
15 40 0 8 0.466462
15 41 0 8 0.432283
15 42 0 8 0.37982
15 43 0 8 0.460547
15 44 0 8 0.44513
15 45 0 8 0.3765
15 46 0 8 0.349421
15 47 0 8 0.369373
15 49 0 8 0.355037
15 50 0 8 0.405535
15 53 0 8 0.395491
16 25 0 8 0.39385
16 26 0 8 0.414106
16 27 0 8 0.565245
16 28 0 8 0.559144
16 29 0 8 0.877027
16 30 0 8 0.75648
16 31 0 8 0.683328
16 32 0 8 0.621784
16 33 0 8 0.507755
16 34 0 8 0.467586
16 35 0 8 0.443727
16 36 0 8 0.533525
16 37 0 8 0.570519
16 38 0 8 0.648429
16 39 0 8 0.453241
16 40 0 8 0.523414
16 41 0 8 0.580799
16 42 0 8 0.445686
16 43 0 8 0.4969
16 44 0 8 0.462308
16 45 0 8 0.397953
16 46 0 8 0.383209
16 47 0 8 0.449784
16 49 0 8 0.367925
16 50 0 8 0.47956
16 51 0 8 0.346453
16 53 0 8 0.438556
17 27 0 8 0.358273
17 28 0 8 0.520777
17 29 0 8 0.774887
17 30 0 8 0.710114
17 31 0 8 0.487366
17 32 0 8 0.561429
17 33 0 8 0.485545
17 35 0 8 0.369092
17 36 0 8 0.4895
17 37 0 8 0.439361
17 38 0 8 0.533377
17 39 0 8 0.381033
17 40 0 8 0.452961
17 41 0 8 0.429681
17 43 0 8 0.40254
17 44 0 8 0.386256
17 46 0 8 0.358888
17 47 0 8 0.427277
18 27 0 8 0.946498
18 28 0 8 0.922083
18 29 0 8 0.956791
18 30 0 8 0.738413
18 31 0 8 0.496897
18 32 0 8 0.779145
18 33 0 8 0.577588
18 34 0 8 0.679361
18 35 0 8 0.868468
18 36 0 8 0.892874
18 37 0 8 0.688678
18 38 0 8 0.91759
18 39 0 8 0.427005
18 40 0 8 0.484569
18 41 0 8 0.510335
18 42 0 8 0.827646
18 43 0 8 0.78513
18 44 0 8 0.846849
18 45 0 8 0.866885
18 46 0 8 0.761635
18 47 0 8 0.349558
18 49 0 8 0.387962
18 50 0 8 0.779891
18 53 0 8 0.777523
18 61 0 8 0.469832
19 28 0 8 0.88754
19 29 0 8 0.942395
19 30 0 8 0.815787
19 31 0 8 0.517666
19 32 0 8 0.681919
19 33 0 8 0.53978
19 34 0 8 0.486113
19 35 0 8 0.683113
19 36 0 8 0.821426
19 37 0 8 0.621334
19 38 0 8 0.822791
19 39 0 8 0.452196
19 40 0 8 0.389852
19 41 0 8 0.462079
19 42 0 8 0.565167
19 43 0 8 0.613268
19 44 0 8 0.619057
19 45 0 8 0.629166
19 46 0 8 0.569615
19 47 0 8 0.357242
19 50 0 8 0.500104
19 53 0 8 0.531414
20 29 0 8 0.765087
20 30 0 8 0.524481
20 32 0 8 0.685113
20 33 0 8 0.445344
20 34 0 8 0.545999
20 35 0 8 0.684679
20 36 0 8 0.789362
20 37 0 8 0.52426
20 38 0 8 0.740936
20 39 0 8 0.367605
20 40 0 8 0.433058
20 42 0 8 0.634175
20 43 0 8 0.68244
20 44 0 8 0.709856
20 45 0 8 0.679846
20 46 0 8 0.653495
20 49 0 8 0.393354
20 50 0 8 0.662184
20 53 0 8 0.690746
20 61 0 8 0.470486
21 30 0 8 0.46001
21 31 0 8 0.45826
21 32 0 8 0.525295
21 33 0 8 0.34575
21 34 0 8 0.40806
21 35 0 8 0.480978
21 36 0 8 0.494007
21 38 0 8 0.558067
21 40 0 8 0.383661
21 41 0 8 0.410644
21 42 0 8 0.426607
21 43 0 8 0.407555
21 44 0 8 0.404343
21 45 0 8 0.409123
21 46 0 8 0.369971
21 50 0 8 0.352719
21 53 0 8 0.483195
22 32 0 8 0.376886
24 40 0 8 0.354537
25 34 0 8 0.456302
25 35 0 8 0.545928
25 36 0 8 0.715208
25 37 0 8 0.742042
25 38 0 8 0.815553
25 39 0 8 0.548786
25 40 0 8 0.623463
25 41 0 8 0.560865
25 42 0 8 0.422724
25 43 0 8 0.529934
25 44 0 8 0.547832
25 45 0 8 0.527426
25 46 0 8 0.557897
25 47 0 8 0.571945
25 48 0 8 0.444531
25 49 0 8 0.504555
25 50 0 8 0.533076
25 51 0 8 0.364221
25 53 0 8 0.544971
25 61 0 8 0.371065
25 64 0 8 0.355481
25 65 0 8 0.355802
26 35 0 8 0.592743
26 36 0 8 0.853876
26 37 0 8 0.678777
26 38 0 8 0.884225
26 39 0 8 0.457302
26 40 0 8 0.401563
26 41 0 8 0.404398
26 42 0 8 0.455848
26 43 0 8 0.614064
26 44 0 8 0.625644
26 45 0 8 0.635478
26 46 0 8 0.64335
26 47 0 8 0.461777
26 50 0 8 0.448727
26 53 0 8 0.420463
27 36 0 8 0.950443
27 37 0 8 0.819537
27 38 0 8 0.932548
27 39 0 8 0.471476
27 40 0 8 0.515063
27 41 0 8 0.423162
27 42 0 8 0.836289
27 43 0 8 0.877546
27 44 0 8 0.874869
27 45 0 8 0.90546
27 46 0 8 0.834284
27 47 0 8 0.432972
27 49 0 8 0.469892
27 50 0 8 0.806419
27 53 0 8 0.787765
27 61 0 8 0.434183
28 37 0 8 0.448857
28 38 0 8 0.707639
28 42 0 8 0.48067
28 43 0 8 0.585165
28 44 0 8 0.588365
28 45 0 8 0.547783
28 46 0 8 0.515274
28 50 0 8 0.469207
28 53 0 8 0.427366
29 38 0 8 0.694229
29 40 0 8 0.447283
29 42 0 8 0.486898
29 43 0 8 0.485483
29 44 0 8 0.570147
29 45 0 8 0.559694
29 46 0 8 0.629803
29 50 0 8 0.427933
29 53 0 8 0.469255
30 40 0 8 0.346051
31 40 0 8 0.415477
31 41 0 8 0.358133
32 41 0 8 0.509317
32 42 0 8 0.531921
32 43 0 8 0.60526
32 44 0 8 0.636552
32 45 0 8 0.61561
32 46 0 8 0.662831
32 47 0 8 0.499195
32 48 0 8 0.405229
32 49 0 8 0.506194
32 50 0 8 0.618187
32 51 0 8 0.385373
32 53 0 8 0.59118
32 58 0 8 0.356305
32 61 0 8 0.428322
32 64 0 8 0.375227
32 65 0 8 0.3657
33 42 0 8 0.61514
33 43 0 8 0.669328
33 44 0 8 0.699449
33 45 0 8 0.697636
33 46 0 8 0.72526
33 47 0 8 0.641222
33 48 0 8 0.510847
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33 50 0 8 0.668417
33 51 0 8 0.504429
33 52 0 8 0.413163
33 53 0 8 0.61306
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33 58 0 8 0.361299
33 61 0 8 0.418807
33 64 0 8 0.421692
33 65 0 8 0.426285
34 43 0 8 0.833864
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34 47 0 8 0.559871
34 48 0 8 0.368812
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34 51 0 8 0.46204
34 53 0 8 0.806874
34 58 0 8 0.470129
34 61 0 8 0.604079
34 64 0 8 0.438377
34 65 0 8 0.414886
35 44 0 8 0.721755
35 45 0 8 0.736466
35 46 0 8 0.720146
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35 50 0 8 0.70511
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35 53 0 8 0.661219
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35 64 0 8 0.366552
35 65 0 8 0.364759
36 45 0 8 0.841161
36 46 0 8 0.828117
36 47 0 8 0.433082
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36 51 0 8 0.346425
36 53 0 8 0.73992
36 58 0 8 0.431438
36 61 0 8 0.528703
37 46 0 8 0.632068
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37 49 0 8 0.458065
37 50 0 8 0.535346
37 51 0 8 0.371561
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38 47 0 8 0.419209
38 49 0 8 0.577718
38 50 0 8 0.868302
38 51 0 8 0.428133
38 53 0 8 0.844965
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38 59 0 8 0.378488
38 61 0 8 0.657245
38 64 0 8 0.430135
38 65 0 8 0.387888
39 49 0 8 0.391153
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39 53 0 8 0.480562
40 49 0 8 0.422575
40 50 0 8 0.517916
40 51 0 8 0.37167
40 53 0 8 0.530492
40 58 0 8 0.358585
40 61 0 8 0.429089
40 64 0 8 0.371846
40 65 0 8 0.362418
41 50 0 8 0.48384
41 51 0 8 0.370569
41 53 0 8 0.46045
41 61 0 8 0.34653
41 64 0 8 0.363437
41 65 0 8 0.367503
42 51 0 8 0.505685
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42 54 0 8 0.34639
42 57 0 8 0.408862
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43 64 0 8 0.536206
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44 63 0 8 0.372627
44 64 0 8 0.458424
44 65 0 8 0.446513
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45 59 0 8 0.354417
45 61 0 8 0.521937
45 64 0 8 0.391486
45 65 0 8 0.383167
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46 61 0 8 0.65484
46 63 0 8 0.349568
46 64 0 8 0.452847
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47 59 0 8 0.358318
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49 58 0 8 0.353807
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50 64 0 8 0.595629
50 65 0 8 0.562395
51 60 0 8 0.371052
51 61 0 8 0.609578
51 62 0 8 0.368774
51 63 0 8 0.4198
51 64 0 8 0.54029
51 65 0 8 0.545424
53 64 0 8 0.410607
53 65 0 8 0.379824
END