PFRMAT RR
TARGET T0348
AUTHOR 5370-1100-4902
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa5str2_5near5nsep5.entmi_epplcc.th62.47.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
MDAKFLEILVCPLCKGPLVFDKSKDELICKGDRLAFPIKDGIPMMLESEA
RELAPEEEVKLEHHHHHH
3 12 0 8 0.0124303913985
3 13 0 8 0.0142124306409
3 14 0 8 0.0137082769347
3 20 0 8 0.0108556023344
3 22 0 8 0.0109956450306
3 29 0 8 0.0142098282214
3 30 0 8 0.0122154966132
3 31 0 8 0.0133987516724
3 32 0 8 0.0152371332957
3 35 0 8 0.011362618702
3 40 0 8 0.0128037735278
3 44 0 8 0.0115669411583
3 53 0 8 0.0108570336651
4 13 0 8 0.0200569767513
4 14 0 8 0.0140964277943
4 20 0 8 0.0158912839524
4 21 0 8 0.011981343924
4 29 0 8 0.0148789102596
4 32 0 8 0.0160320748441
4 35 0 8 0.0153234685606
4 40 0 8 0.0112852292538
4 44 0 8 0.0175869553995
4 46 0 8 0.0132699319101
4 49 0 8 0.0112608641018
5 14 0 8 0.0238286307166
5 15 0 8 0.0111683806209
5 16 0 8 0.0120698587152
5 18 0 8 0.0831521806702
5 20 0 8 0.0601230457361
5 22 0 8 0.0110620392565
5 27 0 8 0.0865053981197
5 28 0 8 0.0262322578424
5 29 0 8 0.0284463963026
5 30 0 8 0.0122586317154
5 32 0 8 0.01415342078
5 34 0 8 0.0162090068358
5 35 0 8 0.0185979302918
5 36 0 8 0.0476493240539
5 37 0 8 0.0200393128293
5 38 0 8 0.0412226492448
5 40 0 8 0.0176174362372
5 42 0 8 0.0313866097868
5 43 0 8 0.0304720545348
5 44 0 8 0.0455247738829
5 45 0 8 0.0358987496738
5 46 0 8 0.0485110501912
5 49 0 8 0.0134152119754
5 50 0 8 0.0230398373841
5 53 0 8 0.0162961228266
5 61 0 8 0.0148521053394
6 15 0 8 0.0163339880295
6 16 0 8 0.0226243285901
6 18 0 8 0.122230110993
6 19 0 8 0.0123976985043
6 20 0 8 0.0791815392084
6 21 0 8 0.0120890515586
6 22 0 8 0.0183850849118
6 25 0 8 0.0116685656375
6 26 0 8 0.0184780888765
6 27 0 8 0.116741933695
6 28 0 8 0.0398983430519
6 29 0 8 0.0468685982216
6 30 0 8 0.0207154214
6 31 0 8 0.0108360841886
6 32 0 8 0.0267412585547
6 33 0 8 0.0135628992787
6 34 0 8 0.0234649425997
6 35 0 8 0.0471545390577
6 36 0 8 0.0793734676422
6 37 0 8 0.0373944902474
6 38 0 8 0.0742242554761
6 40 0 8 0.0207563119155
6 41 0 8 0.0121886591627
6 42 0 8 0.0385662296006
6 43 0 8 0.0405411406537
6 44 0 8 0.0804079293699
6 45 0 8 0.049522090144
6 46 0 8 0.0575131443394
6 49 0 8 0.0334098607811
6 50 0 8 0.0464024398393
6 53 0 8 0.028353815231
6 58 0 8 0.0123517983314
6 61 0 8 0.0132895476467
7 18 0 8 0.017296004906
7 22 0 8 0.0108273986137
7 27 0 8 0.0139584670337
7 29 0 8 0.0115342157338
7 35 0 8 0.0121843651706
7 37 0 8 0.0121371963183
7 38 0 8 0.0120073355882
7 40 0 8 0.0110175378841
7 42 0 8 0.0111941771037
7 43 0 8 0.0170346244034
7 45 0 8 0.011447229864
8 18 0 8 0.0816118736637
8 20 0 8 0.0490585341811
8 22 0 8 0.017669614747
8 27 0 8 0.0825640338766
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8 29 0 8 0.0270401464275
8 30 0 8 0.01248413136
8 32 0 8 0.0149695395167
8 34 0 8 0.0157398231409
8 35 0 8 0.0157050808414
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8 37 0 8 0.0179946894654
8 38 0 8 0.0377627325982
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8 43 0 8 0.0306535082303
8 44 0 8 0.0719594999577
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8 46 0 8 0.0442671546881
8 49 0 8 0.0119730812423
8 50 0 8 0.0259223747474
8 53 0 8 0.0183401931764
9 18 0 8 0.232197946884
9 19 0 8 0.0287714059605
9 20 0 8 0.104756165658
9 22 0 8 0.015580132178
9 26 0 8 0.0120761370521
9 27 0 8 0.164806018347
9 28 0 8 0.0467739352145
9 29 0 8 0.0493005591891
9 30 0 8 0.0186139351713
9 31 0 8 0.0146054610369
9 32 0 8 0.0197925384058
9 33 0 8 0.0137349842642
9 34 0 8 0.0207962590539
9 35 0 8 0.0285117495608
9 36 0 8 0.0742323880368
9 37 0 8 0.0635380706473
9 38 0 8 0.13728803518
9 40 0 8 0.0150576964752
9 41 0 8 0.0116052292543
9 42 0 8 0.0606113246837
9 43 0 8 0.0559087527541
9 44 0 8 0.0504833588249
9 45 0 8 0.115970641633
9 46 0 8 0.0591939819957
9 49 0 8 0.0123447392687
9 50 0 8 0.0400609942669
9 53 0 8 0.0393121480728
9 61 0 8 0.0225245583348
10 19 0 8 0.0238902755271
10 20 0 8 0.0834615432812
10 21 0 8 0.0188559601793
10 22 0 8 0.0179713002207
10 24 0 8 0.0168312453241
10 25 0 8 0.0222059246045
10 26 0 8 0.0273579343715
10 27 0 8 0.136033343707
10 28 0 8 0.0520070754075
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10 30 0 8 0.0279099400651
10 31 0 8 0.022569157298
10 32 0 8 0.0255776517623
10 33 0 8 0.0204330914209
10 34 0 8 0.0362663414198
10 35 0 8 0.0778120159777
10 36 0 8 0.0762125039289
10 37 0 8 0.039041496451
10 38 0 8 0.0666430823426
10 39 0 8 0.0160435254897
10 40 0 8 0.0213991420476
10 41 0 8 0.0181739311044
10 42 0 8 0.0418670733588
10 43 0 8 0.0751038732471
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10 46 0 8 0.0563300194011
10 47 0 8 0.0117459225553
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10 50 0 8 0.0750641863506
10 51 0 8 0.0124343275579
10 53 0 8 0.044093117888
10 57 0 8 0.0151937379515
10 58 0 8 0.0146417647881
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11 20 0 8 0.0499469351177
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11 23 0 8 0.0125299014119
11 24 0 8 0.016790127097
11 25 0 8 0.0166246457508
11 26 0 8 0.0208590424229
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11 31 0 8 0.0155026451391
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11 33 0 8 0.0224597580907
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11 35 0 8 0.0387578327319
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11 37 0 8 0.0376817322932
11 38 0 8 0.0421400020977
11 39 0 8 0.0164537969145
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11 41 0 8 0.0252921338194
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11 43 0 8 0.0661899360575
11 44 0 8 0.03400809195
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11 46 0 8 0.0316425577388
11 47 0 8 0.0116179485793
11 49 0 8 0.0163368506909
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11 53 0 8 0.0198107228117
12 21 0 8 0.0225553644749
12 22 0 8 0.0203254488468
12 23 0 8 0.0203747646952
12 24 0 8 0.0220312046693
12 25 0 8 0.0187706984124
12 26 0 8 0.0194462864992
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12 34 0 8 0.0250791583184
12 35 0 8 0.0400203314631
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13 22 0 8 0.0260519752356
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13 43 0 8 0.0310565579412
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13 49 0 8 0.0182939351708
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13 51 0 8 0.0109501677508
13 53 0 8 0.0188363119126
13 58 0 8 0.0290178550815
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14 23 0 8 0.023514909053
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14 31 0 8 0.039483257151
14 32 0 8 0.0907801973536
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14 42 0 8 0.0274213358151
14 43 0 8 0.0375171292635
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15 24 0 8 0.0279100376558
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END