Best Alignments for T0347

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vk1A/T0347-1vk1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vk1A/T0347-1vk1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3995e-033.35e-28 d.268.1.2
1xb4A/T0347-1xb4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xb4A/T0347-1xb4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8908e-011.55e-07
1xw3A/T0347-1xw3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xw3A/T0347-1xw3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4424e+001.91e-19
1yzsA/T0347-1yzsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yzsA/T0347-1yzsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5183e+001.06e-17
1gs5A/T0347-1gs5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gs5A/T0347-1gs5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0324e+013.10e-11 c.73.1.2
1q7fA/T0347-1q7fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7fA/T0347-1q7fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0554e+015.89e-04 b.68.9.1
1z5zA/T0347-1z5zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5zA/T0347-1z5zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3193e+012.95e+01
1p3dA/T0347-1p3dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p3dA/T0347-1p3dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4547e+011.13e-09 c.5.1.1
c.59.1.1
c.72.2.1
1b4pA/T0347-1b4pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b4pA/T0347-1b4pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6266e+011.32e-08 a.45.1.1
c.47.1.5
1exqA/T0347-1exqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1exqA/T0347-1exqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7800e+012.19e-06 1b9dA c.55.3.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001